next up previous
Next: About this document ... Up: Using Information Content and Previous: Using Information Content and

Bibliography

Amrein et al., 1994
Amrein H, Hedley ML, Maniatis T (1994): The role of specific protein-RNA and protein-protein interactions in positive and negative control of pre-mRNA splicing by Transformer 2.
Cell 76:735-746.

Bronner et al., 1994
Bronner CE, Baker SM, Morrison PT, Warren G, Smith LG, Lescoe MK, Kane M, Earabino C, Lipford J, Lindblom A, Tannergord P, Bollag RJ, Godwin AR, Ward DC, Nordenskjold M, Fishel R, Kolodner R, Liskay RM (1994): Mutation in the DNA mismatch repair gene homologue hMLH1 is associated with hereditary non-polyposis colon cancer.
Nature 362:258-261.

Fishel et al., 1993
Fishel R, Lescoe MK, Rao MRS, Copeland NG, Jenkins NA, Garber J, Kane M, Kolodner R (1993): The human mutator gene homolog MSH2 and its association with hereditary nonpolyposis colon cancer.
Cell 75:1027-1038.

Leach et al., 1993
Leach FS, Nicolaides NC, Papadopoulos N, Liu B, Jen J, Parsons R, Peltomäki P, Sistonen P, Aaltonen LA, Nyström-Lahti M, Guan XY, Zhang J, Meltzer PS, Yu JW, Kao FT, Chen DJ, Cerosaletti KM, Fournier REK, Todd S, Lewis T, Leach RJ, Naylor SL, Weissenbach J, Mecklin JP, Järvinen H, Petersen GM, Hamilton SR, Green J, Jass J, Watson P, Lynch HT, Trent JM, de la Chapelle A, Kinzler KW, Vogelstein B (1993): Mutations of a mutS homolog in hereditary nonpolyposis colorectal cancer.
Cell 75:1215-1225.

Mount, 1982
Mount SM (1982): A catalogue of splice junction sequences.
Nucleic Acids Res. 10:459-472.

Nakai and Sakamoto, 1994
Nakai K, Sakamoto H (1994): Construction of a novel database containing aberrant splicing mutations of mammalian genes.
Gene 141:171-177.

Papadopoulos et al., 1994
Papadopoulos N, Nicolaides NC, Wei YF, Ruben SM, Carter KC, Rosen CA, Haseltine WA, Fleischmann RD, Fraser CM, Adams MD, Venter JC, Hamilton SR, Petersen GM, Watson P, Lynch HT, Peltomäki P, Mecklin JP, de la Chapelle A, Kinzler KW, Vogelstein B (1994): Mutation of a mutL homolog in hereditary colon cancer.
Science 263:1625-1629.

Pierce, 1980
Pierce JR (1980):.
An Introduction to Information Theory: Symbols, Signals and Noise.
second edition, Dover Publications, Inc., New York.

Roscigno et al., 1993
Roscigno RF, Weiner M, Garcia-Blanco MA (1993): A mutational analysis of the polypyrimidine tract of introns: effects of sequence differences in pyrimidine tracts on splicing.
J. Biol. Chem. 268:11222-11229.

Schneider and Stephens, 1990
Schneider TD, Stephens RM (1990): Sequence logos: a new way to display consensus sequences.
Nucleic Acids Res. 18:6097-6100.
http://www.lecb.ncifcrf.gov/~toms/paper/logopaper/.

Schneider, 1994
Schneider TD (1994): Sequence logos, machine/channel capacity, Maxwell's demon, and molecular computers: a review of the theory of molecular machines.
Nanotechnology 5:1-18.
http://www.lecb.ncifcrf.gov/~toms/paper/nano2/.

Shannon and Weaver, 1949
Shannon CE, Weaver W (1949):.
The Mathematical Theory of Communication.
University of Illinois Press, Urbana.

Sloane and Wyner, 1993
Sloane NJA, Wyner AD (1993):.
Claude Elwood Shannon: Collected Papers.
IEEE Press, Piscataway, NJ.

Stephens and Schneider, 1992
Stephens RM, Schneider TD (1992): Features of spliceosome evolution and function inferred from an analysis of the information at human splice sites.
J. Mol. Biol. 228:1124-1136.
http://www.lecb.ncifcrf.gov/~toms/paper/splice/.



Tom Schneider
2000-11-09